BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004A05LP1|AL425212
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig914 1593 0.0
>3x_Contig914
Length = 2833
Score = 1593 bits (803), Expect = 0.0
Identities = 804/805 (99%)
Strand = Plus / Plus
Query: 1 tctcacgcttccacttcgctagtaactcaataccatctataccttgtacattagtagtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2007 tctcacgcttccacttcgctagtaactcaataccatctataccttgtacattagtagtct 2066
Query: 61 cgacaccaaacttgacacgtttggattccctgccattgcgtttgtcgtcctgtagtccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2067 cgacaccaaacttgacacgtttggattccctgccattgcgtttgtcgtcctgtagtccca 2126
Query: 121 tagaagcggtcttaccacgatctttcttctttaacatctccggagcaacttctctgtata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2127 tagaagcggtcttaccacgatctttcttctttaacatctccggagcaacttctctgtata 2186
Query: 181 atgcaatcaaacccttagcagcaatggcgacactcttggccttggagcccttatattcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2187 atgcaatcaaacccttagcagcaatggcgacactcttggccttggagcccttatattcgg 2246
Query: 241 ttaaatcttgtagtaaagtctcatcgatagctaatggggcacgagtcaagatttctctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2247 ttaaatcttgtagtaaagtctcatcgatagctaatggggcacgagtcaagatttctctga 2306
Query: 301 ctgtattcaaacccacagtggcaacctcatttgaaacaccgtcgctaacaaactcgttgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2307 ctgtattcaaacccacagtggcaacctcatttgaaacaccgtcgctaacaaactcgttgg 2366
Query: 361 ctatcttcctcaccatcacttcaatggtctctggaggaacaagatcatgacaggattggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2367 ctatcttcctcaccatcacttcaatggtctctggaggaacaagatcatgacaggattggg 2426
Query: 421 ctgcagcagatagaatcttggtaacgtccctttgctttggcgtcaggtattttaagaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2427 ctgcagcagatagaatcttggtaacgtccctttgctttggcgtcaggtattttaagaagt 2486
Query: 481 atgaatatagtccaagaaccattaacttgtgtgtacctgttaaacgggataataattgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2487 atgaatatagtccaagaaccattaacttgtgtgtacctgttaaacgggataataattgca 2546
Query: 541 tgatggcagtcttttgttcgaaatcaaatttgttcgaattcttaccacttagatgtcttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2547 tgatggcagtcttttgttcgaaatcaaatttgttcgaattcttaccacttagatgtcttt 2606
Query: 601 caaacaatttctcggcaaacccttgtggatcacgtaatagatggatggcactgaaattta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2607 caaacaatttctcggcaaacccttgtggatcacgtaatagatggatggcactgaaattta 2666
Query: 661 agaaattattctgttgaacacctttagcagatttcttctttacgaccttaagtgcttgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2667 agaaattattctgttgaacacctttagcagatttcttctttacgaccttaagtgcttgct 2726
Query: 721 ctagcttcttacctcttttactagatttcttgttgatctggagcttgtgcttcaaagcgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2727 ctagcttcttacctcttttactagatttcttgttgatctggagcttgtgcttcaaagcgg 2786
Query: 781 tagtatcgatttcatcctcatcktc 805
|||||||||||||||||||||| ||
Sbjct: 2787 tagtatcgatttcatcctcatcgtc 2811
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5679
Number of Sequences: 1807
Number of extensions: 5679
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)